A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
Report
generated on 2021-08-28, 03:43
based on data in:
/work/hobi/jselwyn/Coryphopterus_RAD/NovaSeq/fq_fp1_fp2
General Statistics
Showing 800 samples.
fastp
fastp An ultra-fast all-in-one FASTQ preprocessor (QC, adapters, trimming, filtering, splitting...)
Filtered Reads
Filtering statistics of sampled reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Duplication Rates
Duplication rates of sampled reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Insert Sizes
Insert size estimation of sampled reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Sequence Quality
Average sequencing quality over each base of all reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
GC Content
Average GC content over each base of all reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
N content
Average N content over each base of all reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).